Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | At1D1460_RS16975 | Not Available | Negative | 515458 - 516510 | 36817.8 |
| gntr family transcriptional regulator | At1D1460_RS16980 | Not Available | Positive | 516614 - 517327 | 26432.6 |
| smp-30/gluconolactonase/lre family protein | At1D1460_RS16985 | Not Available | Positive | 517361 - 518281 | 33490.7 |
| hlyd family type i secretion periplasmic adaptor subunit | At1D1460_RS16990 | Not Available | Negative | 518306 - 519619 | 48067.6 |
| type i secretion system permease/atpase | At1D1460_RS16995 | Not Available | Negative | 519606 - 521453 | 65623.7 |
| hypothetical protein | At1D1460_RS17000 | Not Available | Negative | 521468 - 522223 | 25683.1 |
| tonb-dependent receptor | At1D1460_RS17005 | Not Available | Negative | 522328 - 525099 | 99439.9 |
| fecr family protein | At1D1460_RS17010 | Not Available | Negative | 525249 - 526244 | 36424.3 |
| rna polymerase sigma factor | At1D1460_RS17015 | Not Available | Negative | 526355 - 526855 | 18838.7 |
| abc transporter atp-binding protein | At1D1460_RS17020 | Not Available | Negative | 527062 - 527814 | 26776.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


