Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | At1D1460_RS16875 | Not Available | Negative | 490474 - 491379 | 32720.0 |
| isoaspartyl peptidase/l-asparaginase family protein | At1D1460_RS16880 | Not Available | Negative | 491497 - 492441 | 32416.1 |
| hydantoinase/oxoprolinase n-terminal domain-containing protein | At1D1460_RS16885 | Not Available | Negative | 492487 - 494025 | 53302.1 |
| duf917 domain-containing protein | At1D1460_RS16890 | Not Available | Negative | 494022 - 495098 | 38649.5 |
| abc transporter substrate-binding protein | At1D1460_RS16895 | Not Available | Negative | 495214 - 496809 | 58583.6 |
| duf917 domain-containing protein | At1D1460_RS16900 | Not Available | Negative | 496854 - 497987 | 40179.9 |
| hydantoinase/oxoprolinase n-terminal domain-containing protein | At1D1460_RS16905 | Not Available | Negative | 497980 - 499536 | 54100.9 |
| atp-binding cassette domain-containing protein | At1D1460_RS16910 | Not Available | Negative | 499554 - 501200 | 60059.4 |
| abc transporter permease | At1D1460_RS16915 | Not Available | Negative | 501204 - 502085 | 32012.8 |
| abc transporter permease | At1D1460_RS16920 | Not Available | Negative | 502085 - 503113 | 37053.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


