Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmge/prpd family protein | At1D1460_RS16770 | Not Available | Positive | 466625 - 467971 | 46470.4 |
| llm class flavin-dependent oxidoreductase | At1D1460_RS16775 | Not Available | Positive | 467990 - 469309 | 48650.0 |
| methyl-accepting chemotaxis protein | At1D1460_RS16780 | Not Available | Negative | 469388 - 471121 | 63627.3 |
| nad(p)/fad-dependent oxidoreductase | At1D1460_RS16785 | Not Available | Positive | 471441 - 472694 | 45186.5 |
| hypothetical protein | At1D1460_RS16790 | Not Available | Negative | 472710 - 473243 | 19727.9 |
| aa3-type cytochrome c oxidase subunit iv | At1D1460_RS16795 | Not Available | Negative | 473313 - 473537 | 7920.82 |
| trap transporter small permease subunit | At1D1460_RS16805 | Not Available | Positive | 473954 - 474493 | 20150.1 |
| trap transporter large permease | At1D1460_RS16810 | Not Available | Positive | 474526 - 475995 | 52488.5 |
| trap transporter substrate-binding protein | At1D1460_RS16815 | Not Available | Negative | 476383 - 477480 | 40158.9 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | At1D1460_RS16820 | Not Available | Positive | 477785 - 478540 | 27196.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


