Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| error-prone dna polymerase | At1D1460_RS27380 | Not Available | Positive | 58871 - 62134 | 122163.0 |
| hypothetical protein | At1D1460_RS27385 | Not Available | Positive | 62369 - 63487 | 42280.4 |
| hypothetical protein | At1D1460_RS28485 | Not Available | Positive | 64009 - 64185 | 6458.47 |
| duf3991 and toprim domain-containing protein | At1D1460_RS27395 | Not Available | Positive | 64402 - 65325 | 34172.5 |
| mobile mystery protein b | At1D1460_RS27400 | Not Available | Negative | 65286 - 65882 | 22667.8 |
| mobile mystery protein a | At1D1460_RS27405 | Not Available | Negative | 65879 - 66340 | 17229.7 |
| duf1419 domain-containing protein | At1D1460_RS27410 | Not Available | Positive | 66721 - 67323 | 23679.2 |
| duf3085 domain-containing protein | At1D1460_RS27415 | Not Available | Positive | 67335 - 67736 | 15001.9 |
| lactate dehydrogenase | At1D1460_RS27420 | Not Available | Positive | 67865 - 72946 | 188073.0 |
| parb n-terminal domain-containing protein | At1D1460_RS27430 | Not Available | Positive | 73302 - 75059 | 63996.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


