Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf995 domain-containing protein | At1D1460_RS16515 | Not Available | Negative | 410627 - 411130 | 18376.1 |
| glycosyltransferase family 2 protein | At1D1460_RS16520 | Not Available | Negative | 411145 - 413082 | 71376.0 |
| udp-glucose 4-epimerase gale | At1D1460_RS16525 | Not Available | Negative | 413079 - 414062 | 35236.8 |
| udp-glucuronic acid decarboxylase family protein | At1D1460_RS16530 | Not Available | Negative | 414064 - 415086 | 37760.0 |
| hypothetical protein | At1D1460_RS16535 | Not Available | Positive | 415481 - 415831 | 12004.2 |
| helix-turn-helix domain-containing protein | At1D1460_RS16540 | Not Available | Negative | 415891 - 416664 | 28185.2 |
| hypothetical protein | At1D1460_RS16550 | Not Available | Positive | 417575 - 418531 | 33460.3 |
| hypothetical protein | At1D1460_RS16555 | Not Available | Positive | 418683 - 420701 | 73055.0 |
| type i secretion system permease/atpase | At1D1460_RS16560 | Not Available | Positive | 420783 - 422987 | 79181.2 |
| hlyd family type i secretion periplasmic adaptor subunit | At1D1460_RS16565 | Not Available | Positive | 422996 - 424354 | 50128.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


