Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | At1D1460_RS16465 | Not Available | Negative | 395051 - 395785 | 25913.0 |
| gnat family n-acetyltransferase | At1D1460_RS16470 | Not Available | Positive | 396019 - 397665 | 62925.4 |
| amidohydrolase | At1D1460_RS16475 | Not Available | Positive | 397726 - 398880 | 41874.8 |
| cellulose synthase | At1D1460_RS16480 | Not Available | Negative | 398909 - 401257 | 85103.0 |
| glycosyl hydrolase family 8 | At1D1460_RS16485 | Not Available | Negative | 401248 - 402303 | 37382.7 |
| cellulose biosynthesis cyclic di-gmp-binding regulatory protein bcsb | At1D1460_RS16490 | Not Available | Negative | 402300 - 404801 | 88887.5 |
| udp-forming cellulose synthase catalytic subunit | At1D1460_RS16495 | Not Available | Negative | 404798 - 406987 | 81754.4 |
| cellulose biosynthesis protein bcsn | At1D1460_RS16500 | Not Available | Negative | 407082 - 408077 | 34832.3 |
| age family epimerase/isomerase | At1D1460_RS16505 | Not Available | Positive | 408415 - 409599 | 44368.4 |
| glycoside hydrolase family 26 protein | At1D1460_RS16510 | Not Available | Negative | 409651 - 410613 | 36281.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


