Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | At1D1460_RS16410 | Not Available | Positive | 383201 - 383998 | 27458.0 |
| lrp/asnc family transcriptional regulator | At1D1460_RS16420 | Not Available | Negative | 384207 - 384665 | 16965.5 |
| alanine racemase | At1D1460_RS16425 | Not Available | Positive | 384792 - 385958 | 40837.1 |
| d-amino acid dehydrogenase | At1D1460_RS16430 | Not Available | Positive | 385966 - 387222 | 45163.5 |
| gntr family transcriptional regulator | At1D1460_RS16435 | Not Available | Negative | 387275 - 387985 | 25835.9 |
| ba14k family protein | At1D1460_RS16440 | Not Available | Positive | 388165 - 388656 | 18419.4 |
| sigma-54-dependent transcriptional regulator | At1D1460_RS16445 | Not Available | Negative | 388754 - 390118 | 49881.8 |
| sensor histidine kinase | At1D1460_RS16450 | Not Available | Negative | 390120 - 391961 | 67499.1 |
| dicarboxylate/amino acid:cation symporter | At1D1460_RS16455 | Not Available | Positive | 392198 - 393544 | 47130.9 |
| aspartate aminotransferase family protein | At1D1460_RS16460 | Not Available | Negative | 393662 - 395014 | 48910.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


