Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | At1D1460_RS16360 | Not Available | Positive | 372021 - 373097 | 39218.3 |
| abc transporter substrate-binding protein | At1D1460_RS16365 | Not Available | Positive | 373148 - 374398 | 45727.5 |
| carbohydrate abc transporter permease | At1D1460_RS16370 | Not Available | Positive | 374573 - 375484 | 33886.1 |
| carbohydrate abc transporter permease | At1D1460_RS16375 | Not Available | Positive | 375489 - 376343 | 30745.6 |
| alpha-glucosidase | At1D1460_RS16380 | Not Available | Positive | 376355 - 378349 | 74609.6 |
| pilus assembly protein tadg-related protein | At1D1460_RS16385 | Not Available | Negative | 378372 - 379661 | 45843.4 |
| abc transporter permease | At1D1460_RS16390 | Not Available | Positive | 380086 - 380871 | 28053.2 |
| abc transporter substrate-binding protein | At1D1460_RS16395 | Not Available | Positive | 380868 - 381818 | 34969.2 |
| hydroxyethylthiazole kinase | At1D1460_RS16400 | Not Available | Positive | 381815 - 382555 | 26116.3 |
| thiamine phosphate synthase | At1D1460_RS16405 | Not Available | Positive | 382542 - 383204 | 23003.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


