Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | At1D1460_RS16305 | Not Available | Negative | 358966 - 360135 | 40550.7 |
| hypothetical protein | At1D1460_RS16310 | Not Available | Positive | 360269 - 360598 | 12477.9 |
| flavin reductase family protein | At1D1460_RS16315 | Not Available | Negative | 360885 - 361409 | 18603.8 |
| aldo/keto reductase | At1D1460_RS16320 | Not Available | Negative | 361409 - 362302 | 31912.5 |
| llm class flavin-dependent oxidoreductase | At1D1460_RS16325 | Not Available | Negative | 362302 - 363459 | 42500.1 |
| gntr family transcriptional regulator | At1D1460_RS16330 | Not Available | Positive | 363560 - 364264 | 25968.3 |
| lysr substrate-binding domain-containing protein | At1D1460_RS16335 | Not Available | Positive | 364294 - 364656 | 13037.7 |
| eal domain-containing protein | At1D1460_RS16340 | Not Available | Positive | 365174 - 366769 | 57983.4 |
| duf2865 domain-containing protein | At1D1460_RS16345 | Not Available | Negative | 366824 - 367600 | 28741.8 |
| autotransporter outer membrane beta-barrel domain-containing protein | At1D1460_RS16350 | Not Available | Negative | 367974 - 370742 | 94473.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


