Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | At1D1460_RS16255 | Not Available | Negative | 345189 - 345683 | 17375.9 |
| amidohydrolase/deacetylase family metallohydrolase | At1D1460_RS16260 | Not Available | Negative | 345768 - 346991 | 43925.7 |
| abc transporter permease | At1D1460_RS16265 | Not Available | Negative | 346993 - 347868 | 31568.8 |
| abc transporter permease | At1D1460_RS16270 | Not Available | Negative | 347868 - 348809 | 33865.7 |
| abc transporter substrate-binding protein | At1D1460_RS16275 | Not Available | Negative | 348916 - 350442 | 55820.4 |
| glycosyltransferase family 4 protein | At1D1460_RS16280 | Not Available | Positive | 350947 - 352071 | 42094.6 |
| polysaccharide biosynthesis/export family protein | At1D1460_RS16285 | Not Available | Positive | 352488 - 353684 | 42442.6 |
| efflux rnd transporter periplasmic adaptor subunit | At1D1460_RS16290 | Not Available | Positive | 353975 - 355252 | 45006.9 |
| efflux rnd transporter permease subunit | At1D1460_RS16295 | Not Available | Positive | 355249 - 358389 | 111426.0 |
| hypothetical protein | At1D1460_RS16300 | Not Available | Negative | 358386 - 358966 | 20692.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


