Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc metallochaperone aztd | At1D1460_RS16205 | Not Available | Positive | 333786 - 335036 | 45124.7 |
| trap transporter substrate-binding protein | At1D1460_RS16210 | Not Available | Negative | 335106 - 336104 | 36208.4 |
| trap transporter large permease subunit | At1D1460_RS16215 | Not Available | Negative | 336121 - 337953 | 62419.3 |
| llm class flavin-dependent oxidoreductase | At1D1460_RS16220 | Not Available | Negative | 337985 - 339112 | 41240.4 |
| abc transporter substrate-binding protein | At1D1460_RS16225 | Not Available | Negative | 339109 - 339960 | 30364.9 |
| arsr/smtb family transcription factor | At1D1460_RS16230 | Not Available | Positive | 340172 - 340537 | 13366.3 |
| glutathione s-transferase family protein | At1D1460_RS16235 | Not Available | Positive | 340539 - 341168 | 23771.3 |
| abc transporter atp-binding protein | At1D1460_RS16240 | Not Available | Negative | 341175 - 343010 | 66627.7 |
| aminotransferase class v-fold plp-dependent enzyme | At1D1460_RS16245 | Not Available | Negative | 343060 - 344256 | 43107.9 |
| iclr family transcriptional regulator | At1D1460_RS16250 | Not Available | Positive | 344346 - 345182 | 30512.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


