Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | At1D1460_RS27335 | Not Available | Positive | 49133 - 50485 | 50165.7 |
| aliphatic sulfonate abc transporter substrate-binding protein | At1D1460_RS27340 | Not Available | Positive | 50508 - 51440 | 33163.8 |
| aliphatic sulfonate abc transporter permease ssuc | At1D1460_RS27345 | Not Available | Positive | 51459 - 52259 | 28818.7 |
| atp-binding cassette domain-containing protein | At1D1460_RS27350 | Not Available | Positive | 52356 - 53087 | 26739.5 |
| lysr family transcriptional regulator | At1D1460_RS27355 | Not Available | Positive | 53084 - 54031 | 33835.4 |
| sdr family nad(p)-dependent oxidoreductase | At1D1460_RS27360 | Not Available | Positive | 54063 - 55025 | 35132.9 |
| sdr family nad(p)-dependent oxidoreductase | At1D1460_RS28895 | Not Available | Negative | 54930 - 55289 | 13698.5 |
| non-homologous end-joining dna ligase | At1D1460_RS27365 | Not Available | Negative | 55345 - 56406 | 39660.4 |
| imua family protein | At1D1460_RS27370 | Not Available | Positive | 56690 - 57442 | 26650.0 |
| y-family dna polymerase | At1D1460_RS27375 | Not Available | Positive | 57363 - 58874 | 55686.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


