Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ilvd/edd family dehydratase | At1D1460_RS16000 | Not Available | Negative | 287478 - 289289 | 65112.6 |
| galactofuranose abc transporter, galactofuranose-binding protein ytfq | At1D1460_RS16005 | Not Available | Positive | 289805 - 290770 | 34292.1 |
| sugar abc transporter atp-binding protein | At1D1460_RS16010 | Not Available | Positive | 290846 - 292369 | 54524.9 |
| abc transporter permease | At1D1460_RS16015 | Not Available | Positive | 292369 - 293412 | 35609.1 |
| galactofuranose abc transporter, permease protein yjff | At1D1460_RS16020 | Not Available | Positive | 293409 - 294389 | 34324.1 |
| fadr/gntr family transcriptional regulator | At1D1460_RS16025 | Not Available | Positive | 294408 - 295142 | 26127.4 |
| mfs transporter | At1D1460_RS16030 | Not Available | Negative | 295211 - 296428 | 41383.5 |
| arac family transcriptional regulator | At1D1460_RS16035 | Not Available | Positive | 296611 - 297549 | 34245.2 |
| class i sam-dependent methyltransferase | At1D1460_RS16040 | Not Available | Positive | 297633 - 298271 | 23307.2 |
| error-prone dna polymerase | At1D1460_RS16045 | Not Available | Negative | 298284 - 301559 | 123444.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


