Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | At1D1460_RS15900 | Not Available | Negative | 262297 - 263820 | 54711.8 |
| tetr family transcriptional regulator | At1D1460_RS15905 | Not Available | Negative | 264022 - 264645 | 23187.4 |
| efflux rnd transporter permease subunit | At1D1460_RS15910 | Not Available | Negative | 264764 - 267898 | 111351.0 |
| efflux rnd transporter periplasmic adaptor subunit | At1D1460_RS15915 | Not Available | Negative | 267910 - 269142 | 43839.0 |
| sensor domain-containing diguanylate cyclase | At1D1460_RS15920 | Not Available | Negative | 269377 - 270879 | 57151.1 |
| bifunctional allantoicase/(s)-ureidoglycine aminohydrolase | At1D1460_RS15925 | Not Available | Negative | 271048 - 271872 | 30989.0 |
| class i sam-dependent methyltransferase | At1D1460_RS15930 | Not Available | Negative | 271964 - 273010 | 38938.4 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | At1D1460_RS15935 | Not Available | Positive | 273327 - 275321 | 74470.9 |
| ldh family oxidoreductase | At1D1460_RS15940 | Not Available | Negative | 275355 - 276431 | 38292.7 |
| dna translocase ftsk | At1D1460_RS15945 | Not Available | Negative | 276523 - 279228 | 97122.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


