Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate import atp-binding protein ugpc | At1D1460_RS15850 | Not Available | Positive | 252111 - 253172 | 38405.4 |
| glyoxalase superfamily protein | At1D1460_RS15855 | Not Available | Negative | 253245 - 253688 | 16272.3 |
| ompw/alkl family protein | At1D1460_RS15860 | Not Available | Negative | 253898 - 254596 | 24627.5 |
| mfs transporter | At1D1460_RS15865 | Not Available | Negative | 254906 - 256201 | 46042.1 |
| marr family winged helix-turn-helix transcriptional regulator | At1D1460_RS15870 | Not Available | Negative | 256289 - 256690 | 14374.4 |
| gnat family n-acetyltransferase | At1D1460_RS15875 | Not Available | Negative | 256836 - 257405 | 20193.4 |
| ornithine/lysine decarboxylase | At1D1460_RS15880 | Not Available | Negative | 257599 - 258732 | 41152.3 |
| lysr family transcriptional regulator | At1D1460_RS15885 | Not Available | Positive | 259270 - 260163 | 33225.5 |
| substrate-binding domain-containing protein | At1D1460_RS15890 | Not Available | Negative | 260220 - 261173 | 34395.3 |
| abc transporter permease | At1D1460_RS15895 | Not Available | Negative | 261246 - 262247 | 35032.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


