Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter substrate-binding protein aztc | At1D1460_RS15800 | Not Available | Negative | 242281 - 243306 | 36438.6 |
| zinc abc transporter permease aztb | At1D1460_RS15805 | Not Available | Negative | 243336 - 244202 | 30215.3 |
| zinc abc transporter atp-binding protein azta | At1D1460_RS15810 | Not Available | Negative | 244195 - 245022 | 29614.7 |
| zinc metallochaperone gtpase ziga | At1D1460_RS15815 | Not Available | Positive | 245321 - 246526 | 44850.6 |
| yqaa family protein | At1D1460_RS15820 | Not Available | Negative | 246719 - 247156 | 15893.9 |
| hypothetical protein | At1D1460_RS15825 | Not Available | Negative | 247248 - 247526 | 9971.18 |
| cobw family gtp-binding protein | At1D1460_RS15830 | Not Available | Negative | 247523 - 248629 | 39643.5 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | At1D1460_RS15835 | Not Available | Positive | 248993 - 250303 | 47379.2 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | At1D1460_RS15840 | Not Available | Positive | 250372 - 251253 | 32218.9 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | At1D1460_RS15845 | Not Available | Positive | 251263 - 252111 | 31672.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


