Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-galactarolactone isomerase | At1D1460_RS15595 | Not Available | Negative | 200804 - 201682 | 32106.5 |
| d-galactarolactone cycloisomerase | At1D1460_RS15600 | Not Available | Negative | 201679 - 202815 | 41484.9 |
| 5-dehydro-4-deoxyglucarate dehydratase | At1D1460_RS15605 | Not Available | Negative | 202840 - 203751 | 32473.1 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | At1D1460_RS15610 | Not Available | Negative | 203866 - 204609 | 25781.8 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | At1D1460_RS15615 | Not Available | Negative | 204606 - 205430 | 30351.1 |
| nad-dependent epimerase/dehydratase family protein | At1D1460_RS15620 | Not Available | Positive | 205570 - 206367 | 29054.6 |
| fadr/gntr family transcriptional regulator | At1D1460_RS15625 | Not Available | Positive | 206478 - 207215 | 26513.5 |
| cupin domain-containing protein | At1D1460_RS15630 | Not Available | Positive | 207254 - 207571 | 11757.8 |
| m24 family metallopeptidase | At1D1460_RS15635 | Not Available | Negative | 207594 - 208826 | 43353.8 |
| aldo/keto reductase | At1D1460_RS15640 | Not Available | Negative | 209045 - 211048 | 73013.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


