Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide abc transporter atp-binding protein | At1D1460_RS27285 | Not Available | Negative | 35618 - 37288 | 61123.4 |
| abc transporter permease | At1D1460_RS27290 | Not Available | Negative | 37285 - 38190 | 31988.9 |
| abc transporter permease | At1D1460_RS27295 | Not Available | Negative | 38226 - 39212 | 35206.2 |
| sida/iucd/pvda family monooxygenase | At1D1460_RS27300 | Not Available | Negative | 39209 - 40696 | 53649.7 |
| llm class flavin-dependent oxidoreductase | At1D1460_RS27305 | Not Available | Negative | 40707 - 41933 | 44541.9 |
| ntaa/dmoa family fmn-dependent monooxygenase | At1D1460_RS27310 | Not Available | Negative | 41930 - 43222 | 47313.0 |
| lysr family transcriptional regulator | At1D1460_RS27315 | Not Available | Positive | 43355 - 44356 | 36843.8 |
| duf6088 family protein | At1D1460_RS27320 | Not Available | Positive | 44438 - 45031 | 20764.1 |
| aaa family atpase | At1D1460_RS27325 | Not Available | Positive | 45281 - 46267 | 35744.9 |
| s8 family peptidase | At1D1460_RS27330 | Not Available | Positive | 46271 - 48781 | 91266.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


