Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 105 protein | At1D1460_RS15545 | Not Available | Negative | 189651 - 190781 | 41025.3 |
| glycoside hydrolase family 28 protein | At1D1460_RS15550 | Not Available | Negative | 190790 - 192343 | 55212.5 |
| abc transporter substrate-binding protein | At1D1460_RS15555 | Not Available | Negative | 192456 - 193724 | 45744.1 |
| abc transporter atp-binding protein | At1D1460_RS15560 | Not Available | Negative | 193768 - 194868 | 39766.7 |
| carbohydrate abc transporter permease | At1D1460_RS15565 | Not Available | Negative | 194871 - 195755 | 32848.7 |
| carbohydrate abc transporter permease | At1D1460_RS15570 | Not Available | Negative | 195760 - 196641 | 33123.0 |
| helix-turn-helix domain-containing protein | At1D1460_RS15575 | Not Available | Positive | 196854 - 197780 | 35123.3 |
| trap transporter large permease | At1D1460_RS15580 | Not Available | Negative | 197810 - 199090 | 44961.1 |
| trap transporter small permease | At1D1460_RS15585 | Not Available | Negative | 199092 - 199613 | 18996.6 |
| trap transporter substrate-binding protein | At1D1460_RS15590 | Not Available | Negative | 199683 - 200660 | 35820.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


