Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4160 domain-containing protein | At1D1460_RS15450 | Not Available | Positive | 174085 - 174345 | 9653.7 |
| helix-turn-helix domain-containing protein | At1D1460_RS15455 | Not Available | Positive | 174342 - 174821 | 17839.0 |
| abc transporter atp-binding protein | At1D1460_RS15460 | Not Available | Negative | 174863 - 175936 | 38902.3 |
| carbohydrate abc transporter permease | At1D1460_RS15465 | Not Available | Negative | 176023 - 176898 | 32753.4 |
| carbohydrate abc transporter permease | At1D1460_RS15470 | Not Available | Negative | 176891 - 177844 | 35543.6 |
| abc transporter substrate-binding protein | At1D1460_RS15475 | Not Available | Negative | 177851 - 179140 | 46336.0 |
| tetr/acrr family transcriptional regulator | At1D1460_RS15480 | Not Available | Positive | 179258 - 179968 | 26886.0 |
| gfo/idh/moca family protein | At1D1460_RS15485 | Not Available | Positive | 180214 - 181356 | 42618.1 |
| dihydrodipicolinate synthase family protein | At1D1460_RS15490 | Not Available | Positive | 181367 - 182530 | 42626.0 |
| sugar phosphate isomerase/epimerase family protein | At1D1460_RS15495 | Not Available | Positive | 182555 - 183376 | 29490.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


