Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | At1D1460_RS15345 | Not Available | Positive | 151332 - 151805 | 17101.0 |
| extracellular solute-binding protein | At1D1460_RS15350 | Not Available | Positive | 152054 - 153397 | 49695.1 |
| carbohydrate abc transporter permease | At1D1460_RS15355 | Not Available | Positive | 153479 - 154369 | 32830.5 |
| abc transporter permease subunit | At1D1460_RS15360 | Not Available | Positive | 154377 - 155261 | 32602.5 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | At1D1460_RS15365 | Not Available | Positive | 155294 - 156415 | 40485.1 |
| llm class flavin-dependent oxidoreductase | At1D1460_RS15375 | Not Available | Positive | 156839 - 158197 | 49808.6 |
| aliphatic sulfonate abc transporter substrate-binding protein | At1D1460_RS15380 | Not Available | Positive | 158316 - 159311 | 36121.2 |
| abc transporter permease | At1D1460_RS15385 | Not Available | Positive | 159308 - 160177 | 32251.1 |
| abc transporter atp-binding protein | At1D1460_RS15390 | Not Available | Positive | 160174 - 160905 | 26731.4 |
| carbohydrate abc transporter permease | At1D1460_RS15395 | Not Available | Negative | 160918 - 161745 | 30722.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


