Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class c beta-lactamase | At1D1460_RS15255 | Not Available | Negative | 130742 - 131899 | 41909.6 |
| lysr substrate-binding domain-containing protein | At1D1460_RS15260 | Not Available | Positive | 132033 - 132914 | 31882.8 |
| chromate efflux transporter | At1D1460_RS15265 | Not Available | Negative | 132918 - 134147 | 41925.0 |
| hypothetical protein | At1D1460_RS15270 | Not Available | Negative | 134313 - 134795 | 17462.5 |
| hypothetical protein | At1D1460_RS15275 | Not Available | Negative | 134935 - 135477 | 19754.4 |
| tyrosyl-trna deacylase | At1D1460_RS15280 | Not Available | Negative | 135697 - 137565 | 67855.3 |
| hypothetical protein | At1D1460_RS15285 | Not Available | Negative | 137616 - 138518 | 33092.4 |
| hypothetical protein | At1D1460_RS28325 | Not Available | Negative | 139111 - 139278 | 5869.91 |
| hypothetical protein | At1D1460_RS15290 | Not Available | Positive | 139357 - 139983 | 22844.3 |
| aspartate/glutamate racemase family protein | At1D1460_RS15295 | Not Available | Negative | 139875 - 140678 | 27924.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


