Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | At1D1460_RS15205 | Not Available | Positive | 121649 - 122428 | 27131.4 |
| duf296 domain-containing protein | At1D1460_RS15210 | Not Available | Positive | 122425 - 123318 | 31630.6 |
| ppc domain-containing dna-binding protein | At1D1460_RS15215 | Not Available | Negative | 123357 - 123764 | 13955.7 |
| duf296 domain-containing protein | At1D1460_RS15220 | Not Available | Negative | 123751 - 124317 | 20213.3 |
| lrp/asnc family transcriptional regulator | At1D1460_RS15225 | Not Available | Positive | 124479 - 124997 | 19383.6 |
| fad-dependent monooxygenase | At1D1460_RS15235 | Not Available | Positive | 125485 - 127041 | 56156.7 |
| helix-turn-helix transcriptional regulator | At1D1460_RS15240 | Not Available | Negative | 127057 - 127875 | 30720.5 |
| sdr family oxidoreductase | At1D1460_RS15245 | Not Available | Positive | 127983 - 128867 | 30906.9 |
| hypothetical protein | At1D1460_RS28320 | Not Available | Negative | 128864 - 129031 | 6131.52 |
| solute carrier family 23 protein | At1D1460_RS15250 | Not Available | Negative | 129168 - 130490 | 44776.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


