Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | At1D1460_RS15110 | Not Available | Positive | 98386 - 99804 | 50693.9 |
| epoxide hydrolase family protein | At1D1460_RS15115 | Not Available | Positive | 100001 - 101323 | 48596.1 |
| hypothetical protein | At1D1460_RS15120 | Not Available | Negative | 101477 - 101680 | 7211.83 |
| hypothetical protein | At1D1460_RS28315 | Not Available | Negative | 101832 - 102002 | 6349.29 |
| alpha/beta fold hydrolase | At1D1460_RS15125 | Not Available | Negative | 102070 - 103050 | 35561.2 |
| dps family protein | At1D1460_RS15130 | Not Available | Negative | 103070 - 103588 | 19548.0 |
| fdhf/ydep family oxidoreductase | At1D1460_RS15135 | Not Available | Positive | 104004 - 106298 | 83225.4 |
| atp-binding protein | At1D1460_RS15140 | Not Available | Positive | 106549 - 108129 | 57408.3 |
| response regulator transcription factor | At1D1460_RS15145 | Not Available | Positive | 108122 - 108778 | 24299.7 |
| response regulator transcription factor | At1D1460_RS15150 | Not Available | Positive | 108845 - 109219 | 13507.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


