Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1460 plasmid pTi1D1460,
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal-body rod protein flgf | At1D1460_RS01045 | Not Available | Negative | 205515 - 206249 | 26219.8 |
| duf1217 domain-containing protein | At1D1460_RS01050 | Not Available | Negative | 206251 - 207030 | 28465.6 |
| flagellar motor stator protein mota | At1D1460_RS01055 | Not Available | Positive | 207216 - 208088 | 31532.0 |
| flim/flin family flagellar motor switch protein | At1D1460_RS01060 | Not Available | Positive | 208085 - 209044 | 34513.9 |
| flagellar motor switch protein flin | At1D1460_RS01065 | Not Available | Positive | 209108 - 209647 | 18763.2 |
| flagellar motor switch protein flig | At1D1460_RS01070 | Not Available | Positive | 209675 - 210718 | 38171.2 |
| flagellar biosynthesis protein flhb | At1D1460_RS01075 | Not Available | Positive | 210848 - 211930 | 40898.2 |
| hypothetical protein | At1D1460_RS01080 | Not Available | Positive | 211936 - 212373 | 16027.9 |
| flagellin | At1D1460_RS01090 | Not Available | Positive | 212682 - 213974 | 45035.6 |
| hypothetical protein | At1D1460_RS01095 | Not Available | Positive | 214288 - 214944 | 23557.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


