Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | At1D1460_RS27170 | Not Available | Negative | 13123 - 13515 | 14656.5 |
| lysr substrate-binding domain-containing protein | At1D1460_RS27180 | Not Available | Negative | 13839 - 14735 | 32088.8 |
| phzf family phenazine biosynthesis protein | At1D1460_RS27185 | Not Available | Positive | 14853 - 15725 | 30669.7 |
| abc transporter permease | At1D1460_RS27195 | Not Available | Positive | 16372 - 17097 | 25923.9 |
| abc transporter atp-binding protein | At1D1460_RS27200 | Not Available | Positive | 17106 - 17897 | 28979.1 |
| aliphatic sulfonate abc transporter substrate-binding protein | At1D1460_RS27205 | Not Available | Positive | 17924 - 18886 | 34033.2 |
| llm class flavin-dependent oxidoreductase | At1D1460_RS27210 | Not Available | Positive | 19051 - 19932 | 31374.3 |
| llm class flavin-dependent oxidoreductase | At1D1460_RS27215 | Not Available | Positive | 19929 - 21176 | 45731.1 |
| sdr family nad(p)-dependent oxidoreductase | At1D1460_RS27225 | Not Available | Positive | 21334 - 22104 | 27399.8 |
| gmc family oxidoreductase | At1D1460_RS27230 | Not Available | Positive | 22264 - 23889 | 58517.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


