Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| incp-type conjugal transfer protein trbi | At1D1460_RS28090 | Not Available | Negative | 203211 - 204527 | 47681.2 |
| conjugal transfer protein trbh | At1D1460_RS28095 | Not Available | Negative | 204540 - 205016 | 16076.3 |
| p-type conjugative transfer protein trbg | At1D1460_RS28100 | Not Available | Negative | 205016 - 205870 | 30607.8 |
| conjugal transfer protein trbf | At1D1460_RS28105 | Not Available | Negative | 205888 - 206550 | 24710.3 |
| p-type conjugative transfer protein trbl | At1D1460_RS28110 | Not Available | Negative | 206565 - 207761 | 40668.2 |
| entry exclusion protein trbk | At1D1460_RS28115 | Not Available | Negative | 207755 - 207973 | 7719.26 |
| p-type conjugative transfer protein trbj | At1D1460_RS28120 | Not Available | Negative | 207970 - 208728 | 27880.9 |
| conjugal transfer protein trbe | At1D1460_RS28125 | Not Available | Negative | 208745 - 211213 | 91793.7 |
| conjugal transfer protein trbd | At1D1460_RS28130 | Not Available | Negative | 211224 - 211523 | 11266.1 |
| conjugal transfer pilin trbc | At1D1460_RS28135 | Not Available | Negative | 211516 - 211917 | 13335.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


