Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | At1D1460_RS27980 | Not Available | Positive | 178079 - 180280 | 81545.5 |
| adenylate dimethylallyltransferase ipt | At1D1460_RS27985 | Not Available | Positive | 180978 - 181700 | 27026.8 |
| rolb family protein | At1D1460_RS27990 | Not Available | Positive | 182216 - 182776 | 21026.5 |
| rolb family protein | At1D1460_RS27995 | Not Available | Negative | 183259 - 183882 | 23578.6 |
| d-nopaline dehydrogenase | At1D1460_RS28010 | Not Available | Negative | 184872 - 186113 | 45436.2 |
| ornithine cyclodeaminase | At1D1460_RS28015 | Not Available | Negative | 186621 - 187685 | 38985.5 |
| nad/nadp octopine/nopaline dehydrogenase family protein | At1D1460_RS28020 | Not Available | Negative | 187733 - 188815 | 38715.5 |
| arginase | At1D1460_RS28025 | Not Available | Negative | 188892 - 189866 | 34697.4 |
| nad(p)/fad-dependent oxidoreductase | At1D1460_RS28030 | Not Available | Negative | 189914 - 191332 | 50141.5 |
| (2fe-2s)-binding protein | At1D1460_RS28035 | Not Available | Negative | 191329 - 191622 | 10835.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


