Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1460 plasmid pTi1D1460,
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terc family protein | At1D1460_RS22130 | Not Available | Negative | 1624460 - 1625221 | 27444.8 |
| tetr/acrr family transcriptional regulator | At1D1460_RS22135 | Not Available | Negative | 1625404 - 1626090 | 25385.4 |
| hlyd family secretion protein | At1D1460_RS22140 | Not Available | Positive | 1626251 - 1627465 | 42849.6 |
| dha2 family efflux mfs transporter permease subunit | At1D1460_RS22145 | Not Available | Positive | 1627500 - 1629083 | 57351.7 |
| pyridoxamine 5'-phosphate oxidase family protein | At1D1460_RS22150 | Not Available | Positive | 1629313 - 1629963 | 24239.2 |
| laci family dna-binding transcriptional regulator | At1D1460_RS22155 | Not Available | Positive | 1630081 - 1631103 | 36301.4 |
| xylulokinase | At1D1460_RS22160 | Not Available | Positive | 1631209 - 1632663 | 50677.1 |
| xylose isomerase | At1D1460_RS22165 | Not Available | Positive | 1632723 - 1634033 | 48955.6 |
| gh1 family beta-glucosidase | At1D1460_RS22180 | Not Available | Positive | 1634742 - 1636121 | 51385.6 |
| nad(p)h-dependent oxidoreductase | At1D1460_RS22185 | Not Available | Positive | 1636400 - 1637029 | 23954.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


