Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
46575 bp
Thymine Count
46246 bp
Guanine Count
61583 bp
Cytosine Count
59829 bp
Genome Length
214233 bp
Protein-coding Genes
192 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | At1D1460_RS27690 | Not Available | Positive | 119897 - 120835 | 34610.9 |
| virk family protein | At1D1460_RS27700 | Not Available | Positive | 121736 - 122170 | 15640.0 |
| sdr family nad(p)-dependent oxidoreductase | At1D1460_RS28505 | Not Available | Negative | 122267 - 123018 | 27195.5 |
| sdr family nad(p)-dependent oxidoreductase | At1D1460_RS27720 | Not Available | Positive | 123470 - 123643 | 6655.16 |
| hypothetical protein | At1D1460_RS27730 | Not Available | Negative | 124815 - 125525 | 25512.7 |
| hypothetical protein | At1D1460_RS28510 | Not Available | Negative | 125988 - 126230 | 9355.07 |
| (dimethylallyl)adenosine trna methylthiotransferase | At1D1460_RS27740 | Not Available | Negative | 126670 - 127401 | 27592.1 |
| two-component system sensor kinase vira | At1D1460_RS27750 | Not Available | Positive | 128239 - 130740 | 91326.8 |
| type iv secretion system lytic transglycosylase virb1 | At1D1460_RS27755 | Not Available | Positive | 131285 - 132022 | 26135.3 |
| pilin major subunit virb2 | At1D1460_RS27760 | Not Available | Positive | 132022 - 132387 | 12319.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


