Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain AR_0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed3, complete
Gene Summary
Adenine Count
17966 bp
Thymine Count
18929 bp
Guanine Count
21517 bp
Cytosine Count
22911 bp
Genome Length
81323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f-type conjugal transfer pilus assembly protein trab | AM363_RS02675 | Not Available | Negative | 64554 - 65978 | 49888.8 |
| type-f conjugative transfer system secretin trak | AM363_RS02680 | Not Available | Negative | 65978 - 66718 | 26215.4 |
| type iv conjugative transfer system protein trae | AM363_RS02685 | Not Available | Negative | 66705 - 67271 | 21104.2 |
| type iv conjugative transfer system protein tral | AM363_RS02690 | Not Available | Negative | 67291 - 67596 | 11959.6 |
| type iv conjugative transfer system pilin traa | AM363_RS02695 | Not Available | Negative | 67610 - 67978 | 12826.0 |
| tray domain-containing protein | AM363_RS30335 | Not Available | Negative | 68047 - 68247 | 7648.95 |
| hypothetical protein | AM363_RS02705 | Not Available | Negative | 68332 - 69033 | 27097.9 |
| conjugal transfer relaxosome dna-binding protein tram | AM363_RS02710 | Not Available | Negative | 69268 - 69660 | 15049.0 |
| transglycosylase slt domain-containing protein | AM363_RS02715 | Not Available | Positive | 70166 - 70573 | 15104.0 |
| antirestriction protein | AM363_RS02720 | Not Available | Negative | 70611 - 71138 | 20043.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

