Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain AR_0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed3, complete
Gene Summary
Adenine Count
17966 bp
Thymine Count
18929 bp
Guanine Count
21517 bp
Cytosine Count
22911 bp
Genome Length
81323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AM363_RS02570 | Not Available | Negative | 50535 - 50861 | 12728.2 |
| conjugal transfer protein trbe | AM363_RS02575 | Not Available | Negative | 50872 - 51099 | 8372.44 |
| hypothetical protein | AM363_RS02580 | Not Available | Negative | 51089 - 51370 | 9744.26 |
| type-f conjugative transfer system mating-pair stabilization protein tran | AM363_RS02585 | Not Available | Negative | 51403 - 53358 | 70516.2 |
| type-f conjugative transfer system pilin assembly protein trbc | AM363_RS02590 | Not Available | Negative | 53417 - 54064 | 23781.2 |
| hypothetical protein | AM363_RS02595 | Not Available | Negative | 54209 - 54811 | 22351.5 |
| hypothetical protein | AM363_RS02605 | Not Available | Negative | 55532 - 56080 | 21039.0 |
| conjugal transfer pilus assembly protein trau | AM363_RS02610 | Not Available | Negative | 56095 - 57054 | 35279.4 |
| type-f conjugative transfer system protein traw | AM363_RS02615 | Not Available | Negative | 57098 - 57724 | 23533.4 |
| type-f conjugative transfer system protein trbi | AM363_RS02620 | Not Available | Negative | 57724 - 58113 | 14499.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

