Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain AR_0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed3, complete
Gene Summary
Adenine Count
17966 bp
Thymine Count
18929 bp
Guanine Count
21517 bp
Cytosine Count
22911 bp
Genome Length
81323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv conjugative transfer system coupling protein trad | AM363_RS02520 | Not Available | Negative | 40061 - 42382 | 86130.7 |
| hypothetical protein | AM363_RS02525 | Not Available | Negative | 42454 - 42717 | 9299.84 |
| hypothetical protein | AM363_RS29685 | Not Available | Negative | 42738 - 43430 | 25761.7 |
| hypothetical protein | AM363_RS02535 | Not Available | Negative | 43677 - 44348 | 25252.4 |
| conjugal transfer mating-pair stabilization protein trag | AM363_RS02540 | Not Available | Negative | 44365 - 47190 | 101870.0 |
| conjugal transfer pilus assembly protein trah | AM363_RS02545 | Not Available | Negative | 47190 - 48560 | 50223.4 |
| hypothetical protein | AM363_RS02550 | Not Available | Negative | 48547 - 48975 | 16877.8 |
| type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbb | AM363_RS02555 | Not Available | Negative | 48968 - 49540 | 20457.5 |
| type-f conjugative transfer system pilin chaperone traq | AM363_RS02560 | Not Available | Negative | 49512 - 49751 | 8928.05 |
| type-f conjugative transfer system pilin assembly protein traf | AM363_RS02565 | Not Available | Negative | 49762 - 50514 | 28175.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

