Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain AR_0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed3, complete
Gene Summary
Adenine Count
17966 bp
Thymine Count
18929 bp
Guanine Count
21517 bp
Cytosine Count
22911 bp
Genome Length
81323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tn3 family transposase | AM363_RS01940 | Not Available | Positive | 81888 - 84872 | 113017.0 |
| is110-like element is4321 family transposase | AM363_RS01945 | Not Available | Positive | 84951 - 85955 | 37543.8 |
| duf1173 family protein | AM363_RS01950 | Not Available | Negative | 86174 - 86614 | 16802.9 |
| para family protein | AM363_RS01955 | Not Available | Positive | 86826 - 87452 | 22758.2 |
| hypothetical protein | AM363_RS01960 | Not Available | Positive | 87494 - 87721 | 8341.25 |
| replication initiation protein repe | AM363_RS01965 | Not Available | Negative | 88243 - 88995 | 29024.7 |
| y-family dna polymerase | AM363_RS01970 | Not Available | Negative | 89441 - 90715 | 47573.6 |
| translesion error-prone dna polymerase v autoproteolytic subunit | AM363_RS01975 | Not Available | Negative | 90715 - 91137 | 15590.9 |
| plasmid segregation protein parm | AM363_RS01980 | Not Available | Positive | 91429 - 92382 | 35307.1 |
| plasmid partitioning/stability family protein | AM363_RS01985 | Not Available | Positive | 92388 - 92777 | 14792.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

