Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain AR_0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed3, complete
Gene Summary
Adenine Count
17966 bp
Thymine Count
18929 bp
Guanine Count
21517 bp
Cytosine Count
22911 bp
Genome Length
81323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AM363_RS01725 | Not Available | Negative | 40364 - 40786 | 16455.8 |
| hypothetical protein | AM363_RS01730 | Not Available | Negative | 40833 - 41252 | 15241.6 |
| hnh endonuclease | AM363_RS01740 | Not Available | Positive | 42670 - 43578 | 34366.1 |
| duf305 domain-containing protein | AM363_RS01745 | Not Available | Negative | 43986 - 44336 | 12851.7 |
| silver-binding protein sile | AM363_RS01750 | Not Available | Negative | 44482 - 44913 | 15223.9 |
| copper/silver sensor histidine kinase sils | AM363_RS01755 | Not Available | Negative | 45159 - 46634 | 55947.5 |
| copper/silver response regulator transcription factor silr | AM363_RS01760 | Not Available | Negative | 46627 - 47307 | 25303.9 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel silc | AM363_RS01765 | Not Available | Positive | 47497 - 48882 | 51211.6 |
| cation efflux system protein cusf | AM363_RS01770 | Not Available | Positive | 48912 - 49265 | 12622.1 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit silb | AM363_RS01775 | Not Available | Positive | 49379 - 50671 | 47697.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

