Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain AR_0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed3, complete
Gene Summary
Adenine Count
17966 bp
Thymine Count
18929 bp
Guanine Count
21517 bp
Cytosine Count
22911 bp
Genome Length
81323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid replication initiator repa | AM363_RS02465 | Not Available | Negative | 29037 - 30056 | 39809.0 |
| repa leader peptide tap | AM363_RS30330 | Not Available | Negative | 30049 - 30132 | 3193.13 |
| phospholipase d family protein | AM363_RS02480 | Not Available | Negative | 30553 - 31095 | 19887.7 |
| hypothetical protein | AM363_RS02485 | Not Available | Negative | 31199 - 31507 | 11565.4 |
| duf2726 domain-containing protein | AM363_RS02490 | Not Available | Negative | 31504 - 32154 | 24972.8 |
| hypothetical protein | AM363_RS02495 | Not Available | Negative | 32234 - 32431 | 7803.03 |
| pin domain-containing protein | AM363_RS02500 | Not Available | Negative | 32481 - 33083 | 22182.9 |
| fertility inhibition protein fino | AM363_RS02505 | Not Available | Negative | 33244 - 33837 | 21842.9 |
| type-f conjugative transfer system pilin acetylase trax | AM363_RS02510 | Not Available | Negative | 33994 - 34719 | 26838.4 |
| conjugative transfer relaxase/helicase trai | AM363_RS02515 | Not Available | Negative | 34800 - 40061 | 190695.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

