Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain AR_0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed3, complete
Gene Summary
Adenine Count
17966 bp
Thymine Count
18929 bp
Guanine Count
21517 bp
Cytosine Count
22911 bp
Genome Length
81323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | AM363_RS01190 | Not Available | Negative | 194865 - 195044 | 7196.38 |
| hypothetical protein | AM363_RS01195 | Not Available | Negative | 195146 - 195676 | 19533.7 |
| lysr family transcriptional regulator | AM363_RS01200 | Not Available | Negative | 195958 - 196863 | 33149.6 |
| conjugal transfer protein trag | AM363_RS01205 | Not Available | Positive | 197169 - 199166 | 72940.3 |
| ribbon-helix-helix protein, copg family | AM363_RS01210 | Not Available | Positive | 199163 - 199639 | 17810.2 |
| p-type conjugative transfer atpase trbb | AM363_RS01215 | Not Available | Positive | 199636 - 200706 | 37711.8 |
| trbc/virb2 family protein | AM363_RS01220 | Not Available | Positive | 200703 - 201089 | 13292.5 |
| virb3 family type iv secretion system protein | AM363_RS01225 | Not Available | Positive | 201086 - 201355 | 9566.92 |
| conjugal transfer protein trbe | AM363_RS01230 | Not Available | Positive | 201368 - 203818 | 89960.2 |
| p-type conjugative transfer protein trbj | AM363_RS01235 | Not Available | Positive | 203815 - 204558 | 27314.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

