Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain AR_0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed3, complete
Gene Summary
Adenine Count
17966 bp
Thymine Count
18929 bp
Guanine Count
21517 bp
Cytosine Count
22911 bp
Genome Length
81323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AM363_RS00915 | Not Available | Positive | 150957 - 151238 | 10972.2 |
| is5-like element iskpn26 family transposase | AM363_RS00920 | Not Available | Positive | 151516 - 152496 | 37844.6 |
| non-heme ferritin-like protein | AM363_RS00925 | Not Available | Negative | 152813 - 153313 | 19032.6 |
| is6-like element is26 family transposase | AM363_RS00935 | Not Available | Negative | 153640 - 154344 | 27896.9 |
| hypothetical protein | AM363_RS00940 | Not Available | Positive | 154730 - 155488 | 28291.9 |
| atp-dependent helicase | AM363_RS00945 | Not Available | Positive | 155485 - 157524 | 76466.5 |
| integrase core domain-containing protein | AM363_RS00955 | Not Available | Negative | 157732 - 158199 | 18118.4 |
| hypothetical protein | AM363_RS00960 | Not Available | Negative | 158630 - 158941 | 11309.2 |
| hypothetical protein | AM363_RS00965 | Not Available | Negative | 159026 - 159280 | 9492.25 |
| hnh endonuclease | AM363_RS29885 | Not Available | Negative | 159410 - 160321 | 34442.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

