Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain AR_0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed3, complete
Gene Summary
Adenine Count
17966 bp
Thymine Count
18929 bp
Guanine Count
21517 bp
Cytosine Count
22911 bp
Genome Length
81323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nifb/nifx family molybdenum-iron cluster-binding protein | AM363_RS00870 | Not Available | Negative | 142340 - 142801 | 16973.2 |
| duf134 domain-containing protein | AM363_RS00875 | Not Available | Negative | 142776 - 143096 | 11890.3 |
| is110-like element is5075 family transposase | AM363_RS00880 | Not Available | Negative | 143556 - 144560 | 37469.7 |
| integrase core domain-containing protein | AM363_RS29880 | Not Available | Negative | 144712 - 145152 | 15933.3 |
| abc transporter atp-binding protein | AM363_RS00885 | Not Available | Negative | 145181 - 145891 | 25675.2 |
| abc transporter permease | AM363_RS00890 | Not Available | Negative | 145893 - 147098 | 42914.9 |
| efflux rnd transporter periplasmic adaptor subunit | AM363_RS00895 | Not Available | Negative | 147095 - 148246 | 41260.9 |
| tetr/acrr family transcriptional regulator | AM363_RS00900 | Not Available | Negative | 148243 - 148851 | 22421.2 |
| is110-like element is4321 family transposase | AM363_RS00905 | Not Available | Positive | 149039 - 150043 | 37469.7 |
| type ii toxin-antitoxin system rele/pare family toxin | AM363_RS00910 | Not Available | Positive | 150647 - 150976 | 12493.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

