Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain AR_0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed3, complete
Gene Summary
Adenine Count
17966 bp
Thymine Count
18929 bp
Guanine Count
21517 bp
Cytosine Count
22911 bp
Genome Length
81323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trafs-binding domain-containing protein | AM363_RS00820 | Not Available | Negative | 134506 - 135714 | 45809.4 |
| integrase core domain-containing protein | AM363_RS00825 | Not Available | Positive | 136093 - 136593 | 18075.6 |
| h-ns family nucleoid-associated regulatory protein | AM363_RS00830 | Not Available | Positive | 136605 - 137054 | 17180.4 |
| hypothetical protein | AM363_RS00835 | Not Available | Positive | 137116 - 137520 | 14763.7 |
| integrase core domain-containing protein | AM363_RS00840 | Not Available | Positive | 137622 - 137690 | 2965.68 |
| methyltransferase family protein | AM363_RS00845 | Not Available | Negative | 137980 - 138444 | 17773.4 |
| fad-dependent oxidoreductase | AM363_RS00850 | Not Available | Negative | 138690 - 140348 | 59490.7 |
| arsr/smtb family transcription factor | AM363_RS00855 | Not Available | Positive | 140509 - 140859 | 12959.8 |
| dps family protein | AM363_RS00860 | Not Available | Negative | 141151 - 141627 | 17892.3 |
| paai family thioesterase | AM363_RS30245 | Not Available | Negative | 141742 - 142179 | 15948.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

