Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain AR_0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed3, complete
Gene Summary
Adenine Count
17966 bp
Thymine Count
18929 bp
Guanine Count
21517 bp
Cytosine Count
22911 bp
Genome Length
81323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AM363_RS00765 | Not Available | Negative | 123908 - 125128 | 45597.4 |
| duf4942 domain-containing protein | AM363_RS00770 | Not Available | Negative | 125131 - 125943 | 30369.4 |
| duf6884 domain-containing protein | AM363_RS00775 | Not Available | Positive | 126444 - 127109 | 24436.1 |
| hypothetical protein | AM363_RS00780 | Not Available | Positive | 127147 - 127599 | 16803.4 |
| h-ns family nucleoid-associated regulatory protein | AM363_RS00785 | Not Available | Positive | 127711 - 128115 | 15042.8 |
| tn3 family transposase | AM363_RS00795 | Not Available | Negative | 128776 - 131784 | 113866.0 |
| recombinase family protein | AM363_RS00800 | Not Available | Positive | 131944 - 132501 | 20721.4 |
| duf4231 domain-containing protein | AM363_RS00805 | Not Available | Positive | 132518 - 133381 | 33656.8 |
| tir domain-containing protein | AM363_RS00810 | Not Available | Negative | 133422 - 133826 | 15280.3 |
| tir domain-containing protein | AM363_RS00815 | Not Available | Negative | 134103 - 134501 | 14820.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

