Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain AR_0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed3, complete
Gene Summary
Adenine Count
17966 bp
Thymine Count
18929 bp
Guanine Count
21517 bp
Cytosine Count
22911 bp
Genome Length
81323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trbc/virb2 family protein | AM363_RS00315 | Not Available | Positive | 62451 - 62834 | 13228.4 |
| virb3 family type iv secretion system protein | AM363_RS00320 | Not Available | Positive | 62831 - 63103 | 9576.88 |
| conjugal transfer protein trbe | AM363_RS00325 | Not Available | Positive | 63115 - 65565 | 89536.5 |
| p-type conjugative transfer protein trbj | AM363_RS00330 | Not Available | Positive | 65562 - 66299 | 26986.1 |
| hypothetical protein | AM363_RS00335 | Not Available | Positive | 66312 - 66638 | 11404.3 |
| p-type conjugative transfer protein trbl | AM363_RS00340 | Not Available | Positive | 66635 - 67999 | 45455.2 |
| conjugal transfer protein trbf | AM363_RS00345 | Not Available | Positive | 68029 - 68733 | 26098.9 |
| p-type conjugative transfer protein trbg | AM363_RS00350 | Not Available | Positive | 68730 - 69722 | 35819.9 |
| trbi/virb10 family protein | AM363_RS00355 | Not Available | Positive | 69725 - 71005 | 44854.0 |
| duf2274 domain-containing protein | AM363_RS00360 | Not Available | Positive | 71002 - 71244 | 8571.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

