Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain AR_0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed3, complete
Gene Summary
Adenine Count
17966 bp
Thymine Count
18929 bp
Guanine Count
21517 bp
Cytosine Count
22911 bp
Genome Length
81323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | AM363_RS00265 | Not Available | Negative | 50348 - 50683 | 11692.8 |
| efflux rnd transporter permease subunit | AM363_RS00270 | Not Available | Negative | 50874 - 53990 | 112272.0 |
| efflux rnd transporter periplasmic adaptor subunit | AM363_RS00275 | Not Available | Negative | 54013 - 55128 | 38875.8 |
| tetr/acrr family transcriptional regulator | AM363_RS00280 | Not Available | Negative | 55179 - 55814 | 22968.5 |
| efflux transporter outer membrane subunit | AM363_RS00285 | Not Available | Positive | 55924 - 57348 | 51395.0 |
| lysr family transcriptional regulator | AM363_RS00290 | Not Available | Positive | 57423 - 58367 | 34999.8 |
| eexn family lipoprotein | AM363_RS00295 | Not Available | Positive | 58364 - 58639 | 10129.3 |
| conjugal transfer protein trag | AM363_RS00300 | Not Available | Positive | 58914 - 60929 | 73459.8 |
| ribbon-helix-helix protein, copg family | AM363_RS00305 | Not Available | Positive | 60926 - 61390 | 17429.8 |
| p-type conjugative transfer atpase trbb | AM363_RS00310 | Not Available | Positive | 61387 - 62454 | 37684.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

