Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain AR_0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed3, complete
Gene Summary
Adenine Count
17966 bp
Thymine Count
18929 bp
Guanine Count
21517 bp
Cytosine Count
22911 bp
Genome Length
81323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2285 domain-containing protein | AM363_RS00205 | Not Available | Positive | 41349 - 42116 | 28584.1 |
| helix-turn-helix transcriptional regulator | AM363_RS00210 | Not Available | Positive | 42229 - 42513 | 10596.4 |
| replication initiator protein a | AM363_RS00215 | Not Available | Positive | 42540 - 43382 | 31659.1 |
| para family partition atpase | AM363_RS00225 | Not Available | Positive | 43648 - 44286 | 23146.1 |
| hypothetical protein | AM363_RS00230 | Not Available | Positive | 44283 - 44558 | 9847.83 |
| duf2840 domain-containing protein | AM363_RS00235 | Not Available | Positive | 44555 - 45100 | 19936.3 |
| s26 family signal peptidase | AM363_RS00240 | Not Available | Positive | 45097 - 45696 | 21068.8 |
| relaxase/mobilization nuclease domain-containing protein | AM363_RS00250 | Not Available | Positive | 46133 - 48115 | 73124.9 |
| patatin-like phospholipase family protein | AM363_RS00255 | Not Available | Negative | 48108 - 49418 | 47501.7 |
| duf3313 family protein | AM363_RS00260 | Not Available | Negative | 49718 - 50335 | 22035.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

