Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain AR_0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed3, complete
Gene Summary
Adenine Count
17966 bp
Thymine Count
18929 bp
Guanine Count
21517 bp
Cytosine Count
22911 bp
Genome Length
81323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trae/trak family type iv conjugative transfer system protein | AM363_RS00040 | Not Available | Negative | 6026 - 6811 | 29234.1 |
| type iv conjugative transfer system protein tral | AM363_RS00045 | Not Available | Negative | 6823 - 7140 | 12359.1 |
| hypothetical protein | AM363_RS00050 | Not Available | Negative | 7192 - 7545 | 12424.4 |
| hypothetical protein | AM363_RS29610 | Not Available | Negative | 7835 - 8020 | 7184.6 |
| repb family plasmid replication initiator protein | AM363_RS00060 | Not Available | Negative | 9079 - 9954 | 33237.3 |
| hypothetical protein | AM363_RS00065 | Not Available | Positive | 10496 - 11569 | 40158.8 |
| hypothetical protein | AM363_RS00070 | Not Available | Positive | 11587 - 11787 | 7625.18 |
| hypothetical protein | AM363_RS00075 | Not Available | Positive | 11784 - 12503 | 26659.6 |
| hypothetical protein | AM363_RS00080 | Not Available | Positive | 12770 - 13591 | 31167.0 |
| dna adenine methylase | AM363_RS00085 | Not Available | Negative | 13606 - 14451 | 31964.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

