Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain AR_0116 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain AR_0116 plasmid unnamed3, complete
Gene Summary
Adenine Count
17966 bp
Thymine Count
18929 bp
Guanine Count
21517 bp
Cytosine Count
22911 bp
Genome Length
81323 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4942 domain-containing protein | AM363_RS02785 | Not Available | Negative | 78263 - 79138 | 32583.6 |
| hypothetical protein | AM363_RS02795 | Not Available | Negative | 79187 - 79417 | 8526.61 |
| hypothetical protein | AM363_RS02805 | Not Available | Negative | 79508 - 79735 | 8510.23 |
| duf1380 domain-containing protein | AM363_RS02815 | Not Available | Negative | 80531 - 80929 | 14511.3 |
| trav family lipoprotein | AM363_RS00010 | Not Available | Negative | 662 - 1612 | 33771.1 |
| protein-disulfide isomerase htdt | AM363_RS00015 | Not Available | Negative | 1622 - 2374 | 27995.1 |
| hypothetical protein | AM363_RS00020 | Not Available | Negative | 2480 - 2986 | 18743.6 |
| inchi-type conjugal transfer protein trhb | AM363_RS00025 | Not Available | Negative | 2995 - 4353 | 48168.2 |
| plasmid transfer protein htdo | AM363_RS00030 | Not Available | Negative | 4343 - 4783 | 16386.2 |
| type-f conjugative transfer system secretin trak | AM363_RS00035 | Not Available | Negative | 4785 - 6023 | 44662.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

