Phenylobacterium parvum strain HYN0004

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Phenylobacterium

Description

Phenylobacterium parvum strain HYN0004 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which facilitate motility. This strain is notable for having a single replicon, indicating a streamlined genomic organization. The genomic sequence of Phenylobacterium parvum strain HYN0004 is cataloged under the accession number NZ_CP029479.1. As a member of the genus Phenylobacterium, this strain is likely involved in the degradation of aromatic compounds, which reflects its potential ecological role in bioremediation processes. The presence of flagella suggests that this bacterium can actively navigate its environment, which may enhance its ability to locate and degrade pollutants. The combination of its Gram-negative cell wall structure and motility may also contribute to its adaptability in various ecological niches, particularly those contaminated with phenolic compounds. Overall, Phenylobacterium parvum strain HYN0004 exemplifies the microbial diversity that plays a crucial role in environmental sustainability, particularly in the biotransformation of complex organic pollutants. Further studies could elucidate its specific metabolic pathways and potential applications in bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusPhenylobacterium
SpeciesPhenylobacterium parvum
Strainstrain HYN0004

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Phenylobacterium parvum strain HYN0004
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phenylobacterium parvum strain HYN0004 chromosome, complete

Gene Summary

Adenine Count

425663 bp

Thymine Count

425808 bp

Guanine Count

990054 bp

Cytosine Count

987010 bp

Genome Length

2828535 bp

Protein-coding Genes

2643 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class ii fructose-bisphosphate aldolaseHYN04_RS11360Not AvailableNegative2435052 - 243611638720.3
phosphoglycerate kinaseHYN04_RS11365Not AvailableNegative2436129 - 243733142051.9
type i glyceraldehyde-3-phosphate dehydrogenaseHYN04_RS11370Not AvailableNegative2437336 - 243834335544.6
formate-dependent phosphoribosylglycinamide formyltransferaseHYN04_RS11375Not AvailableNegative2438467 - 243967842384.8
transketolaseHYN04_RS11380Not AvailableNegative2439682 - 244165570120.8
duf4164 family proteinHYN04_RS11385Not AvailablePositive2441786 - 24420499225.73
cell division protein zapaHYN04_RS11390Not AvailablePositive2442053 - 244237911441.7
Ncrna_class:otherNot AvailableNot AvailablePositive2442436 - 2442596Not Available
5-formyltetrahydrofolate cyclo-ligaseHYN04_RS11400Not AvailablePositive2442618 - 244320220871.0
ymdb family metallophosphoesteraseHYN04_RS11405Not AvailablePositive2443212 - 244404829725.6

Displaying genes 2291 – 2300 of 2694 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.