Phenylobacterium zucineum HLK1

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Phenylobacterium

Description

The genus Phenylobacterium comprises 5 species, the first 4 of which were isolated from water or soil. Strain HLK1 was isolated from the human erythroleukemia cell line K562. It is a Gram-negative rod, motile with a polar flagellum that is strictly aerobic and nonfermentative. Its grows optimally at 37 degrees C between pH 6.5 and 7.5. It is a facultative intracellular organism and may have pathogenic relevance with humans and mammals, as it can infect at least HeLa cells. Unlike known intracellular pathogens, P. zucineum maintains a stable association with its host cell without apparently affecting the growth and morphology of the latter (modified from PubMed 16908113 and 18700039). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusPhenylobacterium
SpeciesPhenylobacterium zucineum
StrainHLK1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Phenylobacterium zucineum HLK1
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phenylobacterium zucineum HLK1

Accession NumberNC_011143.1

Gene Summary

Adenine Count

60195 bp

Thymine Count

60273 bp

Guanine Count

132226 bp

Cytosine Count

130282 bp

Genome Length

382976 bp

Protein-coding Genes

386 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
replication initiation proteinPHZ_RS19525Not Available+1 - 108640923.2
aaa family atpasePHZ_RS19530Not Available+2278 - 348343740.7
parb/repb/spo0j family partition proteinPHZ_RS19535Not Available+3578 - 459737981.2
thermonuclease family proteinPHZ_RS19540Not Available-4607 - 509216614.9
luxr family transcriptional regulatorPHZ_RS19545Not Available+5230 - 598827985.6
acyl-homoserine-lactone synthasePHZ_RS19550Not Available+6056 - 676626791.2
lytic transglycosylase domain-containing proteinPHZ_RS19555Not Available+6786 - 744822913.4
trbc/virb2 family proteinPHZ_RS19560Not Available+7474 - 780311068.0
type iv secretion system protein virb3PHZ_RS19565Not Available+7816 - 815112362.3
virb4 family type iv secretion/conjugal transfer atpasePHZ_RS19570Not Available+8144 - 1054990020.1

Displaying genes 1 – 10 of 4346 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites