Escherichia coli strain 3385

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 3385 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments, which is a common characteristic among many E. coli strains. The optimal growth temperature for strain 3385 is approximately 37.0°C, aligning with the typical body temperature of warm-blooded hosts, suggesting an adaptation to living within host-associated environments. As a member of the Enterobacteriaceae family, E. coli strain 3385 is primarily associated with the gastrointestinal tracts of various hosts, where it plays a role in the fermentation of carbohydrates and the synthesis of essential metabolites. The ability of this strain to grow in different oxygen conditions allows it to compete effectively for nutrients within the complex microbial communities of the gut. Understanding the specific traits of E. coli strain 3385 contributes to the broader knowledge of microbial interactions in host environments, particularly regarding nutrient cycling and the maintenance of gut homeostasis. This strain exemplifies the versatility and adaptability of E. coli within host-associated habitats, highlighting its potential role in various symbiotic relationships and its contributions to the overall microbial ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 3385

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 3385
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain 3385


Gene Summary

Adenine Count

22678 bp

Thymine Count

21551 bp

Guanine Count

23522 bp

Cytosine Count

21572 bp

Genome Length

89323 bp

Protein-coding Genes

94 genes

Non-Coding Genes

12 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Is5 transposase and trans-activatorDFS94_RS25065Not Available+23287 - 2426737798.6
type i restriction endonucleaseDFS94_RS25070Not Available+24414 - 2475213133.6
Putative transposase orfbDFS94_RS25075Not Available-24762 - 2517515974.7
Conserved protein of unknown function pdcbDFS94_RS25080Not Available-25180 - 2545810600.9
AttlNot AvailableNot Available+25484 - 25496Not Available
PdcaDFS94_RS25085Not Available-25486 - 256656748.57
Toxin docDFS94_RS25090Not Available-25670 - 2605013616.1
Prevention of host death by doc toxicityDFS94_RS25095Not Available-26050 - 262718133.53
Putative restriction-modification proteinDFS94_RS25100Not Available+26454 - 2801057736.1
Restriction endonuclease subunit sDFS94_RS25105Not Available+28007 - 2927848202.5

Displaying genes 1 – 10 of 5049 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites