Escherichia coli strain 3385

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 3385 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, thriving optimally at 37°C within a mesophilic temperature range. The strain is motile, possessing flagella, and its cellular arrangement is typically found in pairs or as single cells. E. coli 3385 is characterized by having three replicons and a double-membrane structure, which is typical for Gram-negative organisms. This strain is host-associated, meaning it can be found in various organisms, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and many others, encompassing a wide range of vertebrates and invertebrates. The biological interactions it has with these hosts can be classified as free-living, implying some degree of independence from a specific host. E. coli strain 3385 is known for its pathogenicity, particularly in humans, where it is linked to a spectrum of health issues. These include urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and other serious conditions such as hemorrhagic colitis and hemolytic uremic syndrome (HUS). The strain's ability to cause these diverse diseases highlights its significant role in both health and disease within various host species, including mammals and birds. The ecological implications of E. coli strain 3385’s pathogenicity suggest that its presence in multiple hosts could lead to zoonotic transmission and impact public health. Its association with both domestic and wild animals further underscores the importance of monitoring this strain to prevent outbreaks of foodborne and waterborne illnesses.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 3385

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 3385
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain 3385 plasmid unnamed1, complete sequence.

Gene Summary

Adenine Count

28371 bp

Thymine Count

26049 bp

Guanine Count

24498 bp

Cytosine Count

22422 bp

Genome Length

101340 bp

Protein-coding Genes

29 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Is5 transposase and trans-activatorDFS94_RS25065Not AvailablePositive23287 - 2426737798.6
type i restriction endonucleaseDFS94_RS25070Not AvailablePositive24414 - 2475213133.6
Putative transposase orfbDFS94_RS25075Not AvailableNegative24762 - 2517515974.7
Conserved protein of unknown function pdcbDFS94_RS25080Not AvailableNegative25180 - 2545810600.9
AttlNot AvailableNot AvailablePositive25484 - 25496Not Available
PdcaDFS94_RS25085Not AvailableNegative25486 - 256656748.57
Toxin docDFS94_RS25090Not AvailableNegative25670 - 2605013616.1
Prevention of host death by doc toxicityDFS94_RS25095Not AvailableNegative26050 - 262718133.53
Putative restriction-modification proteinDFS94_RS25100Not AvailablePositive26454 - 2801057736.1
Restriction endonuclease subunit sDFS94_RS25105Not AvailablePositive28007 - 2927848202.5

Displaying genes 1 – 10 of 5049 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total