Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 3385 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 3385 plasmid unnamed1, complete sequence.
Gene Summary
Adenine Count
28371 bp
Thymine Count
26049 bp
Guanine Count
24498 bp
Cytosine Count
22422 bp
Genome Length
101340 bp
Protein-coding Genes
29 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Is5 transposase and trans-activator | DFS94_RS25065 | Not Available | Positive | 23287 - 24267 | 37798.6 |
| type i restriction endonuclease | DFS94_RS25070 | Not Available | Positive | 24414 - 24752 | 13133.6 |
| Putative transposase orfb | DFS94_RS25075 | Not Available | Negative | 24762 - 25175 | 15974.7 |
| Conserved protein of unknown function pdcb | DFS94_RS25080 | Not Available | Negative | 25180 - 25458 | 10600.9 |
| Attl | Not Available | Not Available | Positive | 25484 - 25496 | Not Available |
| Pdca | DFS94_RS25085 | Not Available | Negative | 25486 - 25665 | 6748.57 |
| Toxin doc | DFS94_RS25090 | Not Available | Negative | 25670 - 26050 | 13616.1 |
| Prevention of host death by doc toxicity | DFS94_RS25095 | Not Available | Negative | 26050 - 26271 | 8133.53 |
| Putative restriction-modification protein | DFS94_RS25100 | Not Available | Positive | 26454 - 28010 | 57736.1 |
| Restriction endonuclease subunit s | DFS94_RS25105 | Not Available | Positive | 28007 - 29278 | 48202.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





